linux fixed

getCoverageGAN_l.sh

-#! /usr/bin/sh
+#! /usr/bin/bash
 # Script to run the program, generate its coverage information
 # and move it to a directory
 # Make directory to save the output
 mkdir -p Temporary
-GAN_Inputs=(./GAN/*.txt)
+GAN_Inputs=(./GanSamples/*.txt)
 Total=${#GAN_Inputs[@]}
 echo Total $Total
 GAME=0
@@ -20,9 +20,9 @@ for input in "${GAN_Inputs[@]}"; do
   # Generate the coverage information
   fd -d 1 -e gcda -X gcov > /dev/null
   # Make directory to save the output
-  mkdir -p ./GanCoverage/Game$GAME/
-  cp UnixGanInput ./GanCoverage/Game$GAME/input
-  fd -d 1 -e gcov -e gameOut -X mv {} ./GanCoverage/Game$GAME
+  mkdir -p ../.././GanCoverage/Game$GAME/
+  cp UnixGanInput ../.././GanCoverage/Game$GAME/input
+  fd -d 1 -e gcov -e gameOut -X mv {} ../.././GanCoverage/Game$GAME
   cd ../../
   rm -rf ./Temporary/Zork$GAME
 done

shell_test.ipynb

@@ -8,7 +8,7 @@
     {
      "data": {
       "text/plain": [
-       "CompletedProcess(args=['C:\\\\Program Files\\\\Git\\\\git-bash.exe', './getCoverageGAN.sh'], returncode=0)"
+       "CompletedProcess(args=['./getCoverageGAN_l.sh'], returncode=2)"
       ]
      },
      "execution_count": 2,
@@ -19,7 +19,8 @@
    "source": [
     "import subprocess\n",
     "#subprocess.call(['C:\\Users\\User\\AppData\\Roaming\\Microsoft\\Windows\\Start Menu\\Programs\\Windows PowerShell', './getCoverageGAN.sh'])\n",
-    "subprocess.run(['C:\\Program Files\\Git\\git-bash.exe', './getCoverageGAN.sh'])\n"
+    "#subprocess.run(['C:\\Program Files\\Git\\git-bash.exe', './getCoverageGAN.sh'])\n",
+    "subprocess.run(['./getCoverageGAN_l.sh'])\n"
    ]
   },
   {
@@ -66,7 +67,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.8.2"
+   "version": "3.7.6"
   }
  },
  "nbformat": 4,